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	<id>http://cmpdartsvr3.cmp.uea.ac.uk/index.php?action=history&amp;feed=atom&amp;title=In_the_beginning_Growing_a_cone</id>
	<title>In the beginning Growing a cone - Revision history</title>
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	<updated>2026-05-16T09:24:01Z</updated>
	<subtitle>Revision history for this page on the wiki</subtitle>
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		<id>http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php?title=In_the_beginning_Growing_a_cone&amp;diff=5065&amp;oldid=prev</id>
		<title>AndrewBangham at 11:04, 3 June 2011</title>
		<link rel="alternate" type="text/html" href="http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php?title=In_the_beginning_Growing_a_cone&amp;diff=5065&amp;oldid=prev"/>
		<updated>2011-06-03T11:04:52Z</updated>

		<summary type="html">&lt;p&gt;&lt;/p&gt;
&lt;table style=&quot;background-color: #fff; color: #202122;&quot; data-mw=&quot;interface&quot;&gt;
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				&lt;col class=&quot;diff-content&quot; /&gt;
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				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;← Older revision&lt;/td&gt;
				&lt;td colspan=&quot;2&quot; style=&quot;background-color: #fff; color: #202122; text-align: center;&quot;&gt;Revision as of 11:04, 3 June 2011&lt;/td&gt;
				&lt;/tr&gt;&lt;tr&gt;&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot; id=&quot;mw-diff-left-l1&quot;&gt;Line 1:&lt;/td&gt;
&lt;td colspan=&quot;2&quot; class=&quot;diff-lineno&quot;&gt;Line 1:&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[[GFtbox Tutorial pages|Back to Tutorial pages]]&amp;lt;br&amp;gt;&amp;lt;br&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;[[GFtbox Tutorial pages|Back to Tutorial pages]]&amp;lt;br&amp;gt;&amp;lt;br&amp;gt;&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;−&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #ffe49c; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;&lt;del style=&quot;font-weight: bold; text-decoration: none;&quot;&gt;We start with a number of very large screenshots (don&#039;t be daunted they are just here to orient you). They show the &#039;&#039;GFtbox&#039;&#039; graphical interface.&lt;/del&gt;&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot; data-marker=&quot;+&quot;&gt;&lt;/td&gt;&lt;td style=&quot;color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #a3d3ff; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt; &lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==Having already produced a disc with uniform growth on A and B sides (see First tutorial)==&lt;/div&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;div&gt;==Having already produced a disc with uniform growth on A and B sides (see First tutorial)==&lt;/div&gt;&lt;/td&gt;&lt;/tr&gt;
&lt;tr&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br&gt;&lt;/td&gt;&lt;td class=&quot;diff-marker&quot;&gt;&lt;/td&gt;&lt;td style=&quot;background-color: #f8f9fa; color: #202122; font-size: 88%; border-style: solid; border-width: 1px 1px 1px 4px; border-radius: 0.33em; border-color: #eaecf0; vertical-align: top; white-space: pre-wrap;&quot;&gt;&lt;br&gt;&lt;/td&gt;&lt;/tr&gt;

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		<author><name>AndrewBangham</name></author>
	</entry>
	<entry>
		<id>http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php?title=In_the_beginning_Growing_a_cone&amp;diff=5066&amp;oldid=prev</id>
		<title>AndrewBangham: Created page with &#039;Back to Tutorial pages&lt;br&gt;&lt;br&gt; We start with a number of very large screenshots (don&#039;t be daunted they are just here to orient you). They show the &#039;&#039;GFt…&#039;</title>
		<link rel="alternate" type="text/html" href="http://cmpdartsvr3.cmp.uea.ac.uk/wiki/BanghamLab/index.php?title=In_the_beginning_Growing_a_cone&amp;diff=5066&amp;oldid=prev"/>
		<updated>2011-05-10T17:47:34Z</updated>

		<summary type="html">&lt;p&gt;Created page with &amp;#039;&lt;a href=&quot;/wiki/BanghamLab/index.php?title=GFtbox_Tutorial_pages&quot; title=&quot;GFtbox Tutorial pages&quot;&gt;Back to Tutorial pages&lt;/a&gt;&amp;lt;br&amp;gt;&amp;lt;br&amp;gt; We start with a number of very large screenshots (don&amp;#039;t be daunted they are just here to orient you). They show the &amp;#039;&amp;#039;GFt…&amp;#039;&lt;/p&gt;
&lt;p&gt;&lt;b&gt;New page&lt;/b&gt;&lt;/p&gt;&lt;div&gt;[[GFtbox Tutorial pages|Back to Tutorial pages]]&amp;lt;br&amp;gt;&amp;lt;br&amp;gt;&lt;br /&gt;
We start with a number of very large screenshots (don&amp;#039;t be daunted they are just here to orient you). They show the &amp;#039;&amp;#039;GFtbox&amp;#039;&amp;#039; graphical interface.&lt;br /&gt;
==Having already produced a disc with uniform growth on A and B sides (see First tutorial)==&lt;br /&gt;
&lt;br /&gt;
==Add a pattern of polariser==&lt;br /&gt;
{| border=&amp;quot;1&amp;quot; cellpadding=&amp;quot;5&amp;quot; cellspacing=&amp;quot;5&amp;quot;&lt;br /&gt;
|- valign=&amp;quot;top&amp;quot;&lt;br /&gt;
|width=&amp;quot;300px&amp;quot;|&amp;#039;&amp;#039;Select Tool:Factors&amp;#039;&amp;#039; makes the &amp;#039;&amp;#039;Morphogen&amp;#039;&amp;#039; Panel visible. Currently we are controlling the &amp;#039;&amp;#039;Polariser&amp;#039;&amp;#039; factor. It has been selected from a drop down list top right (&amp;#039;&amp;#039;Plot current factor&amp;#039;&amp;#039;). We add a radially increasing gradient of &amp;#039;&amp;#039;Polariser&amp;#039;&amp;#039;. Make sure that the &amp;#039;&amp;#039;Panel Plot Options:Monochrome&amp;#039;&amp;#039; is ticked and the gradient of &amp;#039;&amp;#039;Polariser&amp;#039;&amp;#039; will be as shown. &amp;lt;br&amp;gt;Turn on &amp;#039;&amp;#039;Panel: Plot Options: Pol. grad.&amp;#039;&amp;#039; and turn off&amp;#039;&amp;#039; Panel: Plot Options:FE edges&amp;#039;&amp;#039;.  &amp;lt;br&amp;gt;Then, when growth starts, arrows will point down the polariser gradient.&amp;lt;br&amp;gt;&lt;br /&gt;
&amp;#039;&amp;#039;&amp;#039;What will be the result of growth?&amp;#039;&amp;#039;&amp;#039;&lt;br /&gt;
|width=&amp;quot;500px&amp;quot;|[[File:In the beginning 2 cone startup.jpg|500px|GFtbox interface]]&lt;br /&gt;
|}&lt;br /&gt;
==And grow==&lt;br /&gt;
{| border=&amp;quot;1&amp;quot; cellpadding=&amp;quot;5&amp;quot; cellspacing=&amp;quot;5&amp;quot;&lt;br /&gt;
|- valign=&amp;quot;top&amp;quot;&lt;br /&gt;
|width=&amp;quot;300px&amp;quot;|&amp;#039;&amp;#039;&amp;#039;Now save the project&amp;#039;&amp;#039;&amp;#039; using the &amp;#039;&amp;#039;Save As&amp;#039;&amp;#039; button. &lt;br /&gt;
Change the &amp;#039;&amp;#039;Panel Run:Run until&amp;#039;&amp;#039; box to 3 and click the &amp;#039;&amp;#039;Panel Run:Run until&amp;#039;&amp;#039; button. The canvas will grow in steps set by the &amp;#039;&amp;#039;Panel Simulation:Timescale&amp;#039;&amp;#039; box.&amp;lt;br&amp;gt;&amp;lt;br&amp;gt;&lt;br /&gt;
&amp;lt;small&amp;gt;Idea:To see the arrows more clearly reduce the number by setting Panel: Plot Options: Sparsity to 0.1. Larger values reduce the number of arrows and makes them larger&amp;lt;br&amp;gt;&lt;br /&gt;
Note: there are options to programmatically change the size, colour and density of arrows.&amp;lt;/small&amp;gt;&lt;br /&gt;
|width=&amp;quot;500px&amp;quot;|[[File:GPT in the beginning 2 20110510-000001-0009.png|500px|GFtbox interface]]&lt;br /&gt;
|}&lt;/div&gt;</summary>
		<author><name>AndrewBangham</name></author>
	</entry>
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