Shape and GFtbox modelling: Difference between revisions

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[[Tutorials on the Shape modelling toolbox#Comparing shapes in Shape-Space]]<br><br>
[[Tutorials on the Shape modelling toolbox#Comparing shapes in Shape-Space]]<br><br>
=Title=
=Title=
='''1''' <span style="color:Navy;">'''How''' to analyse 2D shapes using the Graphical User Interface</span>=
The process of analysing a set of images is:-
{| border="0" cellpadding="5" cellspacing="3"
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#Create a '''new project'''. AAMToolbox project names are automatically prefaced with PRJ_. They have a particular directory structure and the images to be analysed need to be copied into the subdirectory called Cropped. It is best if they are all the same size.
#*[[AAMToolbox new project|Tutorial on making a new project.]]
#'''Create a point model''' template. Points are placed around the object of interest, i.e. around a face or leaf. The set of points constitute the '''point model'''.  Every image will be marked up in the same way.
#*[[AAMToolbox template|Tutorial on point model template.]]
#To '''digitise each image''', move the points to the corresponding positions in each image in turn. The positions must'' '''correspond''' to the same material points'' in each image, i.e. the tip of the leaf, the corner of an eye, or halfway along a line between the two ends of the mouth.
#*[[AAMToolbox point model editor|Tutorial on point model editor.]]
#Generate the shape model using''' principal component analysis (PCA)'''
#*[[AAMToolbox statistical model generator|Tutorial on statistical model generator.]]
#'''View the result''' by varying each important component in turn. We call this ''walking'' the shape model. This movie shows a walk.
#*[[AAMToolbox viewing statistical model|Tutorial on viewing statistical model.]]
#'''Best fit point model''' using only the principle components.
#*[[AAMToolbox simplify point model|Tutorial on fitting a model to a particular image.]]
|width="300pt"|<wikiflv width="300" height="300" logo="false"  loop="true" background="white">CartoonPC1.flv|CartoonPC1.png</wikiflv><br>
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Revision as of 14:36, 29 October 2012

Tutorials on the Shape modelling toolbox#Comparing shapes in Shape-Space

Title

1 How to analyse 2D shapes using the Graphical User Interface

The process of analysing a set of images is:-

  1. Create a new project. AAMToolbox project names are automatically prefaced with PRJ_. They have a particular directory structure and the images to be analysed need to be copied into the subdirectory called Cropped. It is best if they are all the same size.
  2. Create a point model template. Points are placed around the object of interest, i.e. around a face or leaf. The set of points constitute the point model. Every image will be marked up in the same way.
  3. To digitise each image, move the points to the corresponding positions in each image in turn. The positions must correspond to the same material points in each image, i.e. the tip of the leaf, the corner of an eye, or halfway along a line between the two ends of the mouth.
  4. Generate the shape model using principal component analysis (PCA)
  5. View the result by varying each important component in turn. We call this walking the shape model. This movie shows a walk.
  6. Best fit point model using only the principle components.
<wikiflv width="300" height="300" logo="false" loop="true" background="white">CartoonPC1.flv|CartoonPC1.png</wikiflv>

Mean s