Software

From BanghamLab
Revision as of 17:26, 29 April 2011 by AndrewBangham (talk | contribs)
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Toolboxes for research

<imgicon>VolViewer.png|160px|VolViewer</imgicon> VolViewer
(PC: Windows)

For interacting with 3D volume images.
Download

The C++ code exploits high end graphics cards by making extensive use of OpenGL and Qt. It is open-source and forms a part of the Open Microscopy Environment (OME).
<imgicon>VolViewer.png|160px|VolViewer</imgicon> VolViewer
(PC: Windows)

For interacting with 3D volume images.
Download

The C++ code exploits high end graphics cards by making extensive use of OpenGL and Qt. It is open-source and forms a part of the Open Microscopy Environment (OME).


160px|VolViewer</imgicon> VolViewer: (PC: Windows) For interacting with 3D volume images. The C++ code exploits high end graphics cards by making extensive use of OpenGL and Qt. It is open-source and forms a part of the Open Microscopy Environment (OME).


160px|GFtbox</imgicon> GFtbox: (Matlab on Win, Mac, Linux, etc) An implementation of the Growing Polarised Tissue Framework for understanting and modelling the relationship between gene activity and the growth of shapes such leaves, flowers, animal embryos and other organs.

Packages to which we contribute

160px|BioformatsConverter</imgicon> BioformatsConverter: This tool allows for the batch conversion of microscope manufacturer proprietary file formats, to the open source OME-TIFF standard.
160px|OMERO</imgicon>

OMERO: Open Microscopy Environment Remote Objects.

Algorithms, demonstrations and tools